Insertion junction: CLIP2.019718_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019718
Chromosome:chromosome 5
Location:1332279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTCAAAGCAGGCCTCACCACACACACACACACACACACACACACACA
Internal bar code:TTAGTTGGTTTAGAAAGCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3756
LEAP-Seq percent confirming:69.0648
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:139

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACTACTGCTGCTCTTGA
Suggested primer 2:TACCGTTTCGTTTCGACCGT