Insertion junction: CLIP2.019726_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019726
Chromosome:chromosome 12
Location:2553436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506900 (1 of 1) PTHR21568:SF0 - TRNA PSEUDOURIDINE SYNTHASE PUS10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCGGAGGCTGCGCCTCCTGGCGCCCAGCCCCTTCTGCGGCGGCCTCC
Internal bar code:CACAGTGGGAGTGTAATCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGCGAAAAGGAAACGGC
Suggested primer 2:CACCTCCAGACAGAAGGTGC