Insertion junction: CLIP2.019735_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019735
Chromosome:chromosome 2
Location:5441766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114001 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGATACTAGCGGAGCACAGGCACAGGCGAAAGATGCATGGGGGCGAA
Internal bar code:TTTGAGGGATTTATATATCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGGCAACAGAGCTCAT
Suggested primer 2:CTCCACAAACGTCAGACCGA