Insertion junction: CLIP2.019748_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019748
Chromosome:chromosome 12
Location:485491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494500 LF2,CDKI1 Cyclin dependent kinase; (1 of 1) PTHR24056//PTHR24056:SF171 - CELL DIVISION PROTEIN KINASE // CYCLIN-DEPENDENT KINASE 20 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCGCGGCGCATACAATGCATATGGGTGCCACTCGGGGTCAGGTCGT
Internal bar code:GGGGCTTCTGTCCTCCGCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2007
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGACGTCTGCGGTCAAA
Suggested primer 2:GGTCGAGACTTAGGGGGAGT