Insertion junction: CLIP2.019753_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019753
Chromosome:chromosome 17
Location:2153099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712200 (1 of 1) K11850 - ubiquitin carboxyl-terminal hydrolase 26/29/37 [EC:3.4.19.12] (USP26_29_37) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCGCCAGCCTGAGCTGGCACAAGACGCTCCACCATTCAAAACCGGC
Internal bar code:AAGGGATCAAAATTCCGGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGTTTGGTGAAGCACA
Suggested primer 2:TATCGTACGCGTCCTGAAGC