Insertion junction: CLIP2.019765_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019765
Chromosome:chromosome 6
Location:5448823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCTGCGCCCGAGCCCAGTGGAGCAGGGCACCAATACCACTCGCCGCA
Internal bar code:ATAGTGTCCTTCGCGCTTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:989
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACTTTGGGCAGTGGGAG
Suggested primer 2:GACGACACACACACACAAGC