Insertion junction: CLIP2.019769_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019769
Chromosome:chromosome 1
Location:2897064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATGAACACCTGCGGCAGGGCGGGTGGGCGCGAGGGGCCGAAGGCGGG
Internal bar code:GGTGTAGTCAGCGGCGGCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGGGTGTGCAGTTTGGA
Suggested primer 2:GGCGTGATGGAGATGTAGGG