Insertion junction: CLIP2.019772_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019772
Chromosome:chromosome 2
Location:3642067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041612

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGCGGTGCATGTTGCCACGGGTAAACCCGTGGAAGGTGCCGCACATG
Internal bar code:TCGAGCGGTCTGATTACTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5112
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:142
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:142

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCAAAGCAACACACCC
Suggested primer 2:TCCTGCTTCTCACACGACAC