Insertion junction: CLIP2.019776_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019776
Chromosome:chromosome 7
Location:3431131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335400 EttA Putative soluble chloroplast ABCF protein, relatated to bacterial EttA which throttles translation speed; (1 of 1) PTHR19211:SF7 - ABC TRANSPORTER-RELATED PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCACCACACTGCTCATCAGCCACGACCGCTGGTTCCTGGACCGCGTG
Internal bar code:ACCAATACTAGCGTACACGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTGCTCGAATACGTTG
Suggested primer 2:TCACTAGTGCAGGGCAGTTG