Insertion junction: CLIP2.019778_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019778
Chromosome:chromosome 2
Location:1263918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082000 AGE1 DNA repair glycosylase; (1 of 1) K03575 - A/G-specific adenine glycosylase (mutY) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGCCGCTGCGAGGTCGCCTTCTTCCGAGTACCGGTGTTCATGCCTG
Internal bar code:GGAGAGTCGCGTTGTGGCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGGGGATCTTGAGCAG
Suggested primer 2:CGTGGGCCAACCTTTTTCAG