Insertion junction: CLIP2.019780_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019780
Chromosome:chromosome 10
Location:1382178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427850 (1 of 1) IPR000014//IPR000104//IPR013767 - PAS domain // Antifreeze protein, type I // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGTTGAAGGGGGCTATGGATGTGGCCGCGGACCGCAACAGCGGCAG
Internal bar code:GTCTTTTGTCTTGATGATCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3539
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACATCCGGCAGTACAT
Suggested primer 2:AATCAAGGGCCGGGGTAAAG