Insertion junction: CLIP2.019785_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019785
Chromosome:chromosome 7
Location:5599366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352250 HEL42 (1 of 2) K14780 - ATP-dependent RNA helicase DHX37/DHR1 [EC:3.6.4.13] (DHX37, DHR1); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCAGCTAGGCACGCCTACCCAGCGTTGTCCAATGGGTATCCGCGGCG
Internal bar code:GAGATTCGGAGGGTGAATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGCGTGCATAATGAGC
Suggested primer 2:GATGTAGCCTCGGTGCCTAC