Insertion junction: CLIP2.019796_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019796
Chromosome:chromosome 8
Location:3064822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375450 SDR13 (1 of 1) 1.1.1.243 - Carveol dehydrogenase; Short-chain dehydrogenase/reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGGAGCCGTTTGCTGCGCGCAGCCTCGCTGGCAAGGTGAGGTTAA
Internal bar code:TGGAATTGGGGATTCGTAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1632
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAAGGACGTAGCGAAGT
Suggested primer 2:GGGTTTTGGCAACCGTGTAC