Insertion junction: CLIP2.019800_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019800
Chromosome:chromosome 3
Location:6138042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190650 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGTGGAGCCCCGAGACCGGCGCGAGCGGCGCGCTGGCGGCGGTGACG
Internal bar code:GACAAAGTATTGCGGGTTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAGTTTCCCCCTTCGCT
Suggested primer 2:AGGATGACGACCTGGTCTCA