Insertion junction: CLIP2.019807_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019807
Chromosome:chromosome 2
Location:6959166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389245 (1 of 1) PTHR24078//PTHR24078:SF205 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGGTGCGGCGGGGGGCAGTAGTGGTGCCACGTTGGGAGGTCTGGG
Internal bar code:TTGTGGGTACCAGACGCAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4295
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACTGCTACCTCCTCCT
Suggested primer 2:CCATGTTCGCGAGTCGTTTC