Insertion junction: CLIP2.019812_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019812
Chromosome:chromosome 1
Location:4033733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026650 (1 of 1) PTHR23293//PTHR23293:SF5 - FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE // PHOSPHOADENOSINE PHOSPHOSULFATE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATTTCCAGGGTGCACCTGGCATGCCCGTGCGGCCTCCCACCTGCAGCT
Internal bar code:ACCACACGTTCAGTAATTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3800
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTCACATATGTTGCTGC
Suggested primer 2:GCCCAATGCCTACTTCCCTT