Insertion junction: CLIP2.019813_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019813
Chromosome:chromosome 5
Location:1102816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248050 (1 of 1) IPR012889 - L-fucose isomerase, N-terminal-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCGCTCTATTGCATTCGGTTCGGTTTAGTTTGGGCTGGTACCTACA
Internal bar code:TACACAGATTTTACATGGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1296
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGGGGGCTGGCTTTGAG
Suggested primer 2:CCGACGCCTCCTTAGTCATC