Insertion junction: CLIP2.019825_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019825
Chromosome:chromosome 9
Location:2231413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTTGAACAGTATTTATACGGTCGAATAATTGGCGTTTCCAGGCCCC
Internal bar code:GCGAAGCCGCAGCAAATAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACTAGCTGGGGCAAGAG
Suggested primer 2:GCACACGGCAGTCTAGTTCT