Insertion junction: CLIP2.019827_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019827
Chromosome:chromosome 1
Location:2442015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014150 MFT5:MAE5,MFT5,MAE5 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAACAGGCTGGCTTGTAGATGTTACCCTCATGTGGCGCGCCACCCAGC
Internal bar code:TATCTTGTTGGAAGGCCTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGATCAGACTAGGCAGAC
Suggested primer 2:GCATGGTATTTTCGCCGTCC