Insertion junction: CLIP2.019831_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019831
Chromosome:chromosome 16
Location:1744507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654950 SRR3 Scavenger receptor cysteine rich (SRCR) protein; (1 of 18) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCACAAACTCTCGGATACTCGGGCCCTGGTCTGGCCTCTTTGCGTCAG
Internal bar code:TTCAGCGGAAGGGTTCGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3429
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTACCGTATAGCCACGCG
Suggested primer 2:GTTGTCCACAGCTTGCTTGG