Insertion junction: CLIP2.019832_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019832
Chromosome:chromosome 13
Location:122544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562700 CSB51,TNP34 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATTGATTGACAGGTTGACGGTTGGGACAGCTCATGTGCGCTCTCCTCT
Internal bar code:AGTGGAGGCGCTGCTGTCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3003
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ATAACAAGGAGGTGGCTGCC
Suggested primer 2:GGGCCGATTCCATATGAGCA