Insertion junction: CLIP2.019848_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019848
Chromosome:chromosome 6
Location:8473163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308850 EIF3X (1 of 1) K03245 - translation initiation factor 3 subunit J (EIF3J); hypothetical eIF3-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACGGCCGTTGGAGCGCCAACGCAACACCCGTCCCGCCAAAACCCGGT
Internal bar code:ACAGTACTGGCAGGTGTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1804
LEAP-Seq percent confirming:24.3243
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGCTCGTTGTTTTGTGA
Suggested primer 2:CTTGTGTTGGCAGTTGGAGC