Insertion junction: CLIP2.019852_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019852
Chromosome:chromosome 17
Location:5151642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736700 (1 of 2) IPR011038 - Calycin-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGGTATACGAGGTGGGCATGCGAATGGCGAGAGAAGCAGCGGCGA
Internal bar code:TTCGGTTTCGACAGGGATCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5081
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTGTTACCAGCCCCTCG
Suggested primer 2:TACATCACACGCTCACCCAC