Insertion junction: CLIP2.019854_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019854
Chromosome:chromosome 3
Location:5953322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189100 (1 of 1) PTHR31606:SF1 - WBP2 ORTHOLOG, ISOFORM E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGTTACCTCGCATACCTGCTGCGGTGAGCCGCCGGTCTTACCAACC
Internal bar code:CATGCTTGGAGAGCGCTCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTAACATGTTCCTTCG
Suggested primer 2:GCACACTGACACACACGAAC