Insertion junction: CLIP2.019855_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019855
Chromosome:chromosome 11
Location:1804447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467650 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCCGAGCCATCACATGCTATCAGGGCCCAACCCCGACTTTGCTGCAA
Internal bar code:GAATTATATCTGGGGGTTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4919
LEAP-Seq percent confirming:90.1515
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCCGTGCTACATCTAT
Suggested primer 2:GTCTAGGACGTAGGCATGGC