Insertion junction: CLIP2.019862_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019862
Chromosome:chromosome 12
Location:4988490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525050 SMC6A (1 of 2) PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGTCGCAGCACCTCAGCCGTCAGGTCCGCCTGCCCCTGCCACTCCT
Internal bar code:TTACTGTTGATGCCGATGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5587
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATGAGCGCGTGAAAGAG
Suggested primer 2:GCTCATGGTCCCACTTCACA