Insertion junction: CLIP2.019867_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019867
Chromosome:chromosome 8
Location:3058303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375400 GSM1 (1 of 1) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED; Gamete-specific minus 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGGGCGCCTACGTGCGGGTCGCGGCGCTGTACGGTGACGAGGCGGC
Internal bar code:GACGCGGGTAGCAGGTCTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1986
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCCCCATCCTCGTCAT
Suggested primer 2:AACCCTTTGTGACCATCCCC