Insertion junction: CLIP2.019869_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019869
Chromosome:chromosome 16
Location:3145978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665100 CAV3 Voltage-gated Ca2+ channel, alpha subunit; (1 of 1) IPR000048//IPR005821 - IQ motif, EF-hand binding site // Ion transport domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCTGCTGCTGCGGTGGTGCGCCAGCGGGTTGTCGTACAGGGTCGCA
Internal bar code:TAGGCTAAGTTTGATGAACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACTGGTTGACTGCAC
Suggested primer 2:ACCTGTGAAATCGCCAGGAG