Insertion junction: CLIP2.019873_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019873
Chromosome:chromosome 5
Location:3084199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755597 Chlorophyll a /Pheophorbide a oxygenase-related protein; (1 of 2) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCTCCTTCTCGCGCTTGGCAGCCAGGGCGTCCTGGGGCGTGGCGTGT
Internal bar code:TAAGCGAGTAGGTAGCAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCTGATGTGGGATGGAT
Suggested primer 2:CTGTGCACGGAGTCCTTCTT