Insertion junction: CLIP2.019884_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019884
Chromosome:chromosome 7
Location:5239634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349200 CDS
lncRNA_TCONS_00101007 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGGCGCTGAGGGCACCGCAGGCAACCCAGGCCGCACCGTGCACCTT
Internal bar code:CTTCCTCAGAGGTAGTCAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3034
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAAGGCCTTTTTCACGG
Suggested primer 2:TTGTCGTCCTTCCAGAAGCC