Insertion junction: CLIP2.019886_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019886
Chromosome:chromosome 12
Location:246523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485200 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGGCAGCTGCAGGAAGCAGGCCGCACGGGCGGTGCGAAAGAAGGGT
Internal bar code:AATTCGATATATGGCACATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2059
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCGGAGAAGGGATGCAG
Suggested primer 2:TCCGATCCGTTGCTAGCATC