Insertion junction: CLIP2.019892_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.019892
Chromosome:chromosome 1
Location:7002853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g050000 (1 of 1) PTHR31204//PTHR31204:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 97 intron
Cre01.g050050 GUM1 Putative guanidinoacetate N-methyltransferase; (1 of 1) 2.1.1.2 - Guanidinoacetate N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGCGGTCAACAGGTGGGCGCGATAGGTGGGGTTGGGGGCAGGAGGC
Internal bar code:AGCTCTTCCTCTACTTCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGGTGTTGGAGGTGTT
Suggested primer 2:TTAACGACCTGCTGCTGGAG