Insertion junction: CLIP2.019905_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019905
Chromosome:chromosome 10
Location:1161393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425700 NUP107 (1 of 1) K14301 - nuclear pore complex protein Nup107 (NUP107, NUP84); Nucleoporin 107 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGACAGGAGGGAAAACCAATGACGGGGCAGCACGAGCTGAGTGCCGG
Internal bar code:ATTGAACGACTGTCCTACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGACTCGCTTATGCAGC
Suggested primer 2:TCACGTCACACTTGTACGGG