Insertion junction: CLIP2.019911_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019911
Chromosome:chromosome 3
Location:4548461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAGGTTGAACAACGCCGTCGCCGCCGCCCGGCGTACCTCCGCATCCA
Internal bar code:AGATTATCACATTAGTTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:418
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGGCGCATTTTCAAG
Suggested primer 2:TCCACCTGCCTCTACCTACC