Insertion junction: CLIP2.019912_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019912
Chromosome:chromosome 16
Location:2443678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660100 (1 of 19) IPR008984 - SMAD/FHA domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAGCTGGGAAGCACCCGACCCCGGCCTCCCCCCGCTACACGAGCCTG
Internal bar code:TCCTTGCTGCGCTACTTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2213
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTCTCGCTGATGCATG
Suggested primer 2:AGGGAGAGGTAGCACGGATT