Insertion junction: CLIP2.019917_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019917
Chromosome:chromosome 11
Location:4392285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g483000 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAGCCGCAGGAGCAGGAGACTCTGAGGGGCTTCCAAGCGCTGATAGA
Internal bar code:GAATCCATGGGAGTATTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2191
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAACAGCTCCAACTCCT
Suggested primer 2:CCAGAAGCTTACCTTGGGCA