Insertion junction: CLIP2.019920_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019920
Chromosome:chromosome 3
Location:1431699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151000 SEX4,DSP8 Laforin glucan phosphatase, chloroplastic; (1 of 1) PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTTACGCTGCCCAGCGTGTTGCCTCCCCTTGCCCCTCTGCACACAC
Internal bar code:GTCTTGTAATGCTCGCATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1471
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCACATCAACTTGGCAC
Suggested primer 2:CAGCACGGGTATTGGCATTG