Insertion junction: CLIP2.019926_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019926
Chromosome:chromosome 16
Location:4995580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686200 TSPSP2,TPT1,TPS3,TSSP2 (1 of 2) K16055 - trehalose 6-phosphate synthase/phosphatase (TPS); Triose-phosphTrehalose-6-phosphate synthase/phosphataseate transporter, class II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCGATGAGCTCTTGGGGGGAGGAGGGGGAGAGGCGCAGGGCGTGTGT
Internal bar code:TGCTCAAAAACATGAGCAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAGGGGGATTACAGTC
Suggested primer 2:GGGGGAGGGAGGTTATGAGT