Insertion junction: CLIP2.019930_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019930
Chromosome:chromosome 7
Location:1275492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322100 UBQ5 Ubiquitin fusion protein; (1 of 1) PF13019 - Telomere stability and silencing (Telomere_Sde2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACGCCCTTCCCAACCGCCCCCAACCGAAAACATCCGCGCCCAC
Internal bar code:AGGGTGTCACTCAAAATTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2542
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCCCCATGCCATTGATT
Suggested primer 2:AGACGACCAACAACGATGCT