Insertion junction: CLIP2.019936_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019936
Chromosome:chromosome 9
Location:5206497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406851 CDH1 Activator and specificity factor for anaphase promoting complex; (1 of 1) K03364 - cell division cycle 20-like protein 1, cofactor of APC complex (CDH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCCTATCCCTGCCCCCTGCTGCCCACCTTGACTGCTGCTGTGTGGTC
Internal bar code:GGTTTGCCGGGGTTGTCGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:586
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACCACTGTCCCTGGCTA
Suggested primer 2:CCATGAACCCTTCCCTTCCC