Insertion junction: CLIP2.019942_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019942
Chromosome:chromosome 17
Location:794766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701500 DNJ1 (1 of 1) K09503 - DnaJ homolog subfamily A member 2 (DNAJA2); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAGCCCCCTCCCCGCCGCTTACTGGGTGGGCAGTTGTATCCGGAGC
Internal bar code:ACATCTAAACGCAGTCTTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3783
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTATCAAGGAGGGCATG
Suggested primer 2:ATGTGCACCTCGAACGTCTT