Insertion junction: CLIP2.019945_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019945
Chromosome:chromosome 1
Location:3073171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019500 (1 of 2) PTHR22847//PTHR22847:SF431 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCTCTCCCACACCCGCCCCCAATCACCCACCCATCACCCCTCACAG
Internal bar code:TATTTTGTTTTAGGGATATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5729
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGCGCTTTTGGTTGAA
Suggested primer 2:ACGCAGACGACAAAAGCCTA