Insertion junction: CLIP2.019964_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019964
Chromosome:chromosome 15
Location:867557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640250 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATCCCAGCCGATGCCCGCACCCACCCCCGTTCACAGCGTCTGACGTG
Internal bar code:TATCTCTAATCAAATGCAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCCGGGCATTGAGTAGT
Suggested primer 2:AGTTTGTTGTGTCCGCATGC