Insertion junction: CLIP2.019980_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.019980
Chromosome:chromosome 8
Location:804315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCAGGCGCAACCAGGCACGATGCGAAGGCGCCAGCGGGCTCCCCGT
Internal bar code:TAAGTAAACATAGACGAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1771
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCTTGCTTCAAAACGG
Suggested primer 2:GCTCCTTCCCTTGTGCTCAT