Insertion junction: CLIP2.019982_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019982
Chromosome:chromosome 8
Location:2615681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373200 FXL7 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATCAGGGCCGGCCAGACGTACTTCCCAAACTCGCCCTTCCTGCTGC
Internal bar code:CGTAGGATTCACGGGAACGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:352
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCTCGTTGGTGCAGAA
Suggested primer 2:AGCACCCATCAGAAGCCTTC