Insertion junction: CLIP2.019984_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.019984
Chromosome:chromosome 7
Location:2895785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332500 AXT2 (1 of 3) PTHR10994:SF69 - PROLINE-RICH PROTEIN 18; Arabinose chain extension enzyme for HRGP 2 3'UTR
Cre07.g332550 PSL1 Signal peptide peptidase, eukaryotic-type; (1 of 1) PTHR12174//PTHR12174:SF23 - SIGNAL PEPTIDE PEPTIDASE // MINOR HISTOCOMPATIBILITY ANTIGEN H13 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCTCCTCCGCCGCCTCGCTGAAGTCAAACACGCTCTTGAACTCCCG
Internal bar code:AGAAGATGCATAATTTAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTAGATGGGTGGGGTA
Suggested primer 2:TGGCCTACCTGCTAAGCCTA