Insertion junction: CLIP2.019987_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019987
Chromosome:chromosome 12
Location:3403800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497900 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACCTGCAGAAGCAGAGCAACCGCTTGCGCGGGCTCGAGACTCCCCAA
Internal bar code:TAATATGTGCCATGTAGATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4071
LEAP-Seq percent confirming:98.9247
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGACCGACAGTTTTGC
Suggested primer 2:TCCAGCCTTCCACTACCGTA