Insertion junction: CLIP2.019992_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019992
Chromosome:chromosome 5
Location:279985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243353 (1 of 14) PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAGCCATGGTGCCCGGGCGCCGTAGCGGCAGAAGCGGCAGCAGCTGT
Internal bar code:CTAGGACGTGAAGTAGCCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AACAATGCCTGCCTGCTACT
Suggested primer 2:CTTTAACACACGCACACGCA