Insertion junction: CLIP2.019997_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.019997
Chromosome:chromosome 4
Location:3288247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226850 ASP1 (1 of 1) 3.4.23.5 - Cathepsin D; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTATTGAGTCCAGGGGTACGTATTCAGAGAGCACAAGGGGAACGGGTG
Internal bar code:GTAGGAGCGGCCTCATTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:832
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTGTGGATCTCCTTGC
Suggested primer 2:GAAATACGGTACACACGCGC