Insertion junction: CLIP2.019997_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019997
Chromosome:chromosome 4
Location:3288251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226850 ASP1 (1 of 1) 3.4.23.5 - Cathepsin D; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCCTGCCATTCCATCCCTCCCATTCCCTCACCCACCAGGTGTGCTCG
Internal bar code:TCCATTGGAAAGGGTAGATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1095
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATACGGTACACACGCGC
Suggested primer 2:ACAGCTGTGGATCTCCTTGC